BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020G03LP1|AL427660
(997 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig561 1931 0.0
>3x_Contig561
Length = 2162
Score = 1931 bits (972), Expect = 0.0
Identities = 992/998 (99%), Gaps = 2/998 (0%)
Strand = Plus / Minus
Query: 1 caaatcccttntttatcggaccaggacatctctccatttggtggatatccagcatcatct 60
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1548 caaatccctt-tttatcggaccaggacttctctccatttggtggatatccagcatcatct 1490
Query: 61 ttccccttgaaaatggatgaaaaggaagacgatgattatttacataacccagatttggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1489 ttccccttgaaaatggatgaaaaggaagacgatgattatttacataacccagatttggaa 1430
Query: 121 gaagatctgagactcgataaaaaaagatttgaattagatttgaaaaatatggataaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1429 gaagatctgagactcgataaaaaaagatttgaattagatttgaaaaatatggataaaagg 1370
Query: 181 tctgcaggtggattaatcggtatattattattatttttgggtgccattgctgtctttatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1369 tctgcaggtggattaatcggtatattattattatttttgggtgccattgctgtctttatc 1310
Query: 241 attctacccgttgttacatttactggagcaggtcgtcatggtagtgcagaagttaccgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 attctacccgttgttacatttactggagcaggtcgtcatggtagtgcagaagttaccgag 1250
Query: 301 cttttgactttakrtgaatacccgcaactatcagctataagaacaagtcttgtagaccct 360
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 cttttgactttatatgaatacccgcaactatcagctataagaacaagtcttgtagaccct 1190
Query: 361 gacacgccatcttctgccaagacagtaaaatctttaagtggcgatacatgggaactagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 gacacgccatcttctgccaagacagtaaaatctttaagtggcgatacatgggaactagta 1130
Query: 421 ttctccgatgagttcaacgcggaaggaagaacgttctttgataatgaagatcagttctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 ttctccgatgagttcaacgcggaaggaagaacgttctttgataatgaagatcagttctgg 1070
Query: 481 actgctccaaatttccattacgatgccaccaaggatttagaatggtattctccccaacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 actgctccaaatttccattacgatgccaccaaggatttagaatggtattctccccaacag 1010
Query: 541 gtaatcacttctgaaggtactttgaaattaagaatggatgcatacaagaacaacgatctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 gtaatcacttctgaaggtactttgaaattaagaatggatgcatacaagaacaacgatctt 950
Query: 601 tactacaggtcggggatgcttcaatcttggaataaactatgtttcactcaaggacgacta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 tactacaggtcggggatgcttcaatcttggaataaactatgtttcactcaaggacgacta 890
Query: 661 gaaatcagcgtaaatcttccaaactacggtacaatatctggtctatggcctggtgcttgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 gaaatcagcgtaaatcttccaaactacggtacaatatctggtctatggcctggtgcttgg 830
Query: 721 acattgggtaatttaggtaggccaggctatcaggccactactgaaggtgtttggccttat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 acattgggtaatttaggtaggccaggctatcaggccactactgaaggtgtttggccttat 770
Query: 781 tcatatgaagcgtgcgatgctggtataacaccaaatcaatcttctccagatggtatttct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tcatatgaagcgtgcgatgctggtataacaccaaatcaatcttctccagatggtatttct 710
Query: 841 tacttgccaggacaaaaactttctgcatgtacatgtgatggtgaagatcatcctaacctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tacttgccaggacaaaaactttctgcatgtacatgtgatggtgaagatcatcctaacctt 650
Query: 901 ggggttggtagaggtgcgcctgaaattgatattatcgaaatcgaaacagacacttcactt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ggggttggtagaggtgcgcctgaaattgatattatcgaaatcgaaacagacacttcactt 590
Query: 961 catggcactggtgttggtgttgca-cmcaatcatatca 997
|||||||||||||||||||||||| | |||||||||||
Sbjct: 589 catggcactggtgttggtgttgcatcacaatcatatca 552
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8059
Number of Sequences: 1807
Number of extensions: 8059
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 997
length of database: 10,358,551
effective HSP length: 16
effective length of query: 981
effective length of database: 10,329,639
effective search space: 10133375859
effective search space used: 10133375859
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)